Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816226.1_cds_XP_016498680.1_12680
CDS Infomation

[gene=LOC107817388] [db_xref=GeneID:107817388] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016498680.1] [location=complement(join(3857..4440,4792..5702,6036..6352))] [gbkey=CDS]
Sequence

ATGCCAGAGGCTCCTTCTGCCTTGTCAGATGATAGTAGTTTTGATGAAAACAACAAAAAA
CTTCTTCAATTCTTCGAAAATATTACAACTAATGCCGATGAAGTTCAAAAAAAGGTTCTT
AACGAAATACTTTCTCGTAATGCTGGAGTTGAGTATTTGCAAAGGCATGGCCTAAATGGA
AAAACTGACTATGAAACCTTCAAAAAAATCATGCCTCTTGTTACATATGAGGATCTCAAG
CCTGATATTGATCGTATTGCTGATGGTGATCGTTCATCTATCCTTTGTTCTCAACCAATT
TCCGAGTTCTTGACAAGTTCTGGCACGTCCGGGGGAGAGAGAAAATTGATGCCAACAGTT
GAAGAAGAGCTAGGGAGAAGGTCATTACTCTACAGCCTTCTAATGCCAGTGATGGATCAA
TTTGTGCCTGATTTACACAAAGGCAAAGGAATGTACTTTTTGTTTATAAAATCAGAAGCC
AAAACTCCAGGTGGTCTTTTAGCTCGTCCAGTTTTAACAAGCTACTATAAAAGTTCATAT
TTCAAGAAAAGACCTTATGATCCTTACACAAATTACACTAGCCCAAATGAAACCATTCTT
TGTCTTGACTCTTACCAAAGCATGTATTCCCAAATTCTTTGTGGACTTTGCCAAAATACT
CAAGTTCTTCGTGTTGGTGCTGTTTTTGCTTCTGGATTTATTCGTGCTATTCGATTTCTC
GAAAAGCACTGGCCTATTCTTTGTAACGATATTAAAACTGGGAGTCTAAATCCTCAAATT
ACAGACCCTGAAGTAAGAGAAGCTGTAATGAAAATTCTTAAACCAAATCCCAAGCTTGCT
GAATTTATTGAAACCGAATGTTGTAAAGAATCATGGAAAGGGATAATTCCTAGACTATGG
CCTAATACTAAGTACGTCGATGTAATTGTGACGGGAACTATGTCACAATATATTCCGACT
CTTAATTATTATGGCAATGATTTACCCCTTGTTTGTACCATGTATGCTTCTTCTGAATGC
TACTTTGGTATAAATCTTAATCCTCTTTGCAAACCAAGTGAAGTTGCTTATACCCTTATA
CCTACAATGGGTTATTTCGAGTTCTTGCCCGTGGCTCGTGAAGATGAAGGAGCAGAAAAA
GCTAACACATATGATAAAAATGATTTGGTAGATCTTGTTGATGTTGAACTTGGACATGAA
TACGAACTCGTCGTCACCACTTATGCAGGACTGTATCGTTATCGTGTTGGGGACATACTT
AAAGTTGCTGGATTCAAGAACAAGGCGCCCCAATTTCATTTCGTATGCAGAAAGAATGTT
GCATTAAGCATAGACTCAGACAAAACAGATGAAGTGGAGTTGCATGACGCTGTTGTAAAA
GCATCAATCCATCTTTTACCATTTGAAGCATCTCTCACTGAATACACAAGTTTTTCTGAC
ACGTCAGCAATCCCGGGACACTATGTTTTGTACTGGGAAATTAATAAAAGTTCTGAAACA
ATAATCCCTACAACAGTTTTTCAAGATTGCTGCCTCACAATTGAAGAATCACTAAACAGT
GTGTATCGACAATGTCGTGTTTCGGACAAGTCAATTGGACCTTTGGAAATTAAGGTTGTG
GAAAATGGAACATTTGATAAGCTTATGGATTATGCAATTAGCAATGGTGCTTCAATTAAT
CAGTACAAAGCGCCGCGGTGTGTGAAGTATGCACCAATTATTGAGCTTCTGAACTCGAGA
GTTATAGCTAATTATTTTAGCCCAAAATGTCCTAATTGGGTTCCTGGTCACAAGCAATGG
TGTTCAAGTTGA

Peptide Sequence

PEP ID

XP_016498680.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MPEAPSALSDDSSFDENNKKLLQFFENITTNADEVQKKVLNEILSRNAGVEYLQRHGLNG
KTDYETFKKIMPLVTYEDLKPDIDRIADGDRSSILCSQPISEFLTSSGTSGGERKLMPTV
EEELGRRSLLYSLLMPVMDQFVPDLHKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSY
FKKRPYDPYTNYTSPNETILCLDSYQSMYSQILCGLCQNTQVLRVGAVFASGFIRAIRFL
EKHWPILCNDIKTGSLNPQITDPEVREAVMKILKPNPKLAEFIETECCKESWKGIIPRLW
PNTKYVDVIVTGTMSQYIPTLNYYGNDLPLVCTMYASSECYFGINLNPLCKPSEVAYTLI
PTMGYFEFLPVAREDEGAEKANTYDKNDLVDLVDVELGHEYELVVTTYAGLYRYRVGDIL
KVAGFKNKAPQFHFVCRKNVALSIDSDKTDEVELHDAVVKASIHLLPFEASLTEYTSFSD
TSAIPGHYVLYWEINKSSETIIPTTVFQDCCLTIEESLNSVYRQCRVSDKSIGPLEIKVV
ENGTFDKLMDYAISNGASINQYKAPRCVKYAPIIELLNSRVIANYFSPKCPNWVPGHKQW
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Transcript Sequence

Gene sequence data has not been registered.